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The domains are separated by the signs of eigenvectors and colored red (+) and blue (-) respectively. The side chain of interfacial residues are displayed.

To learn more about how ENM and PCA can define dynamics domains and their uses, visit our sister web site IDD

Hide/show: slow eigenvectors fast eigenvectors all above all chains chain Achain B   1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

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Click a point on the 2D chart to show/hide the corresponding labels in both the 2D chart and the 3D windows above if the "Chart Control" is checked.

Input file and parameters:
PDB title: HIV-1 PROTEASE COMPLEXED WITH A TRIPEPTIDE INHIBITOR
PDB: 1A30,    chain: AB,    model No.: 1
Exp. method: X-RAY DIFFRACTION (2.00 Å)
Number of system nodes: 198